In 1568, Akbar was secure and powerful but he had no son and heir. His search for blessing for the birth of a successor brought him to the Sufi mystic Shaikh Salim Chisti, who lived in Sikri village. The saint prophesied the birth of three sons and soon after was born Prince Salim, later to become Emperor Jahangir. In gratitude for the blessing Akbar decided to create imperial residences in Sikri, which would function as a joint capital with Agra. As a mark of his faith and his recent victories, he named his new city Fatehpur Sikri. Akbar was a keen builder and the plan of Fatehpur Sikri reveals an architectural mastermind at work. Research has proved that it was planned on a definite mathematical grid.

Fatehpur Sikri is built in red sandstone, and is a beautiful blend of Hindu and Islamic architectural elements. The sandstone is richly ornamented with carving and fretwork. Fatehpur Sikri was abandoned 14 years after its creation. A shortage of water is believed to be the reason. Today it is a ghost city, its architecture is in a perfect state of preservation, and wandering through the palaces it is easy to imagine that this was once a royal residence and a dynamic cultural centre.

The siting of the Jama Masjid marked the actual beginning of the city which came up around it. The palace courts were laid out parallel to the cardinally aligned mosque and the sequential order of the palaces were emphasised by change in level. The most public space was at the lowest level, while the royal harem was at the highest.